Since I had to start over I installed one of my favorite WordPress plugins: Now Reading. The layout was messed up when you went to the full library for any theme I used other than the default. I had this problem even before I started over, but I couldn’t figure out how to fix it back then. The sidebar would be in the correct column, but pushed down and start where the library content ended. I went through the code much more closely this time and finally figured it out.